#!/bin/bash
#SBATCH --job-name=my-conda-job
#SBATCH --output=%j-my-conda-job.out
#SBATCH --nodes=1
### USAGE:
# 1. Replace your_environment and your_file
# 2. Submit job
### Load modules
module purge # unload all modules
module load Anaconda3/2020.11 # load anaconda
### Setup
# setup and activate conda environment
source ~/.bashrc # load .bashrc file to setup conda path
conda activate your_environment # activate environment
### Run
# The -u option forces python output to be unbuffered. Useful for debugging.
python3 -u your_file