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Quickstart

  • About
  • Account and Software Requests
    • General Account Request
    • Classroom Account Request
    • Software Request
  • Cluster Usage: Rules and Guidelines
    • General Etiquette
    • Rules
      • 1. Do not store sensitive information on the cluster
      • 2. Do not abuse cluster resources
    • Guidelines
      • 1. Avoid running scripts directly
      • 2. Avoid running jobs on the ssh nodes
      • 3. (Coming Soon) Use globus to transfer large files onto the cluster
      • 4. Run jobs in an appropriate partition
      • 5. Avoid allocating unnecessary recources
      • 6. Avoid running unnessary jobs
      • 7. Avoid queueing an extreme number of jobs
      • 8. Be aware of software licenses
  • Connecting to Buddy
    • Getting an Account
    • Connecting Through Open Ondemand
    • Connecting Through SSH

General

  • Open OnDemand
    • Access and Login
    • Interactive Applications
      • Queue
      • Number of Hours
      • Number of Cores
      • Version
      • Additonal Modules
      • Other Options
    • File Browser
      • Top Menu
      • Navigation Menu
      • File Context Menu
    • File Editor
      • File Options
      • Editor Options
    • Terminal Access
    • Job Management
      • View Options
      • Job Context Menu
    • Job Composer
      • Overview
      • Creating Job From Template
      • Modifying Job Options
      • Saving and Managing Templates
  • Using the Terminal
    • Background
    • Accessing the Terminal
      • Web browser Access
      • SSH Access
    • Terminal Basics
      • Navigation
      • Creating and Deleting Files and Directories
      • Copy, Move, and Rename
    • Common Commands and Features
      • File Viewing/Editing and Pipes
        • Viewing
        • Editing with nano
        • Editing with vim
        • Pipes
      • Shortcuts
      • Searching
        • grep
        • find
      • File Permissions and Information
        • Listing file info
        • Changing file permissions
      • Compressing and Uncompressing
      • Downloading Files
        • wget
        • sftp
        • git
    • Tips and Tricks
    • Basic Bash Scripting
      • Hello World
      • Basic Logic
        • Variables
        • Branching and Conditions
        • Loops
      • Providing Input
      • Troubleshooting
  • Slurm
    • Terminology
      • Tasks
      • Partitions
      • Cores
    • Commands
    • Sbatch Parameters
      • Common sbatch parameters
    • Interactive Jobs with salloc
  • Common toolchains
    • Component versions in foss toolchain
    • Component versions in intel toolchain
    • Component versions in foss toolchain (deprecated versions)
    • Component versions in intel toolchain (deprecated versions)
  • Data Storage
    • Home Folder
    • Project Space
    • Scratch Storage (Coming Soon)
  • Data Transfer
    • Using SFTP or SCP
    • Using Github
    • Using Globus (Coming Soon)
      • 1. Make an Account and Obtain a Globus ID
      • 2. Log in with Globus ID
      • 3. Connect to Buddy
  • Tips and Tricks
    • Slurm
      • Use %j-PROJECT.out for output files
      • Create general scripts
    • Python
      • Use the -u flag
  • Job Composer
    • Create Job
      • From Default Template
      • From Template
      • From Specified Path
      • From Selected Job

Software

  • Overview
  • ANSYS
  • COMSOL
  • Anaconda
    • Example Script
  • Gaussian
    • Example Script
  • Jupyter/Python
  • BuddyGPT
    • Access
      • User Interface
        • Chat Interface
        • Workspace
      • API
        • API Endpoint
        • Response Formats
        • Accessing Stored LLMs on UCO HPC
        • Downloading Transformers Compatible Models
        • Example Usage
  • R/RStudio
    • Using TensorFlow

Advanced

  • Overview
  • Advanced Slurm
  • Array Jobs
  • Using Git and Github
  • Machine Learning
  • OMPI

Other HPC Resources

  • OURRstore
buddy-documentation
  • Buddy Docs

Buddy Docs

Quickstart

  • About
  • Account and Software Requests
    • General Account Request
    • Classroom Account Request
    • Software Request
  • Cluster Usage: Rules and Guidelines
    • General Etiquette
    • Rules
    • Guidelines
  • Connecting to Buddy
    • Getting an Account
    • Connecting Through Open Ondemand
    • Connecting Through SSH

General

  • Open OnDemand
    • Access and Login
    • Interactive Applications
    • File Browser
    • File Editor
    • Terminal Access
    • Job Management
    • Job Composer
  • Using the Terminal
    • Background
    • Accessing the Terminal
    • Terminal Basics
    • Common Commands and Features
    • Tips and Tricks
    • Basic Bash Scripting
  • Slurm
    • Terminology
    • Commands
    • Sbatch Parameters
    • Interactive Jobs with salloc
  • Common toolchains
    • Component versions in foss toolchain
    • Component versions in intel toolchain
    • Component versions in foss toolchain (deprecated versions)
    • Component versions in intel toolchain (deprecated versions)
  • Data Storage
    • Home Folder
    • Project Space
    • Scratch Storage (Coming Soon)
  • Data Transfer
    • Using SFTP or SCP
    • Using Github
    • Using Globus (Coming Soon)
  • Tips and Tricks
    • Slurm
    • Python
  • Job Composer
    • Create Job

Software

  • Overview
  • ANSYS
  • COMSOL
  • Anaconda
    • Example Script
  • Gaussian
    • Example Script
  • Jupyter/Python
  • BuddyGPT
    • Access
  • R/RStudio
    • Using TensorFlow

Advanced

  • Overview
  • Advanced Slurm
  • Array Jobs
  • Using Git and Github
  • Machine Learning
  • OMPI

Other HPC Resources

  • OURRstore
Next

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